ChIP-seq and ATAC-seq Analysis

ChIP-seq and ATAC-seq Analysis

Our robust ChIP-Seq analysis pipeline includes raw data QC and clean up, reads mapping, differential binding analysis, peak calling and annotation, motif analysis and Gene ontology/ KEGG pathway enrichment analysis

Standard workflow:

  • Quality assessment
  • Reads mapping
  • Peak calling
  • Differential binding analysis

Customized downstream analysis:

  • Annotation: Clinvar/HMGD/Annovar/SnpEff/Functional impact/Population Allele Frequency
  • peak annotation
  • Copy number variation
  • Gene ontology /KEGG pathway enrichment analysis
  • Genomic footprint


Learn more about our Next Generation Sequencing services:

Download brochure Sample submission form/guidelines